Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909562.1_cds_XP_016459751.1_53247
CDS Infomation

[gene=LOC107783292] [db_xref=GeneID:107783292] [protein=aldehyde dehydrogenase family 2 member C4] [protein_id=XP_016459751.1] [location=join(16825..16924,19063..19205,21801..22184,22598..22687,22783..22956,23052..23189,23284..23421,23510..23571,23852..24125)] [gbkey=CDS]
Sequence

ATGGTGAAATCTAATGGAAATTTAGAGTCTCATTTCCAAATTCCAAAGATTAAGTTCACT
CAGCTCTTCATTAATGGCGAATTCGTTGATTCTGTTTCAGGAAATACGTTTGAAACGATA
GATCCTAGAAATGAGGAGGTAATTGCAAGAATTGCTGAAGGAGACAAAGCTGATATTGAT
TTGGCTGTCAAAGCTGCCCGTGAAGCTTTTGACAATGGTCCTTGGCCTCGTTTATCCCCT
ATGGAGAGGAGAAATATAATGCTGAAGTTTGCAGACTTAATCATAGAAAATGCAGAAGAA
ATAGCAGCATTGGATGCAATGGATGCAGGAAAGTTATTTGCTGCTGGAAAAACAATAGAC
GTCCCTAGTGCAGCGCAATTTATGCGTTATTATGCTGGTGCAGCGGATAAAATTCATGGG
ACGACTCTCAAGATGTCACGCGATATACAAGGATACACGTTGCTCGAACCAATTGGGGTT
GTCGGACACATTATCCCCTGGAATTTCCCAACTCAGATGTTTGTTATGAAGGTTGGCCCT
GCACTAGCTGCTGGTTGCACTATGGTTGTCAAACCGGCCGAACAAACCCCTCTTTCTGCT
CTCTATTATGCTCAATTGGCTAAGCAGGCTGGTGTTCCCGATGGCGTGATCAACGTCGTG
ACAGGATTTGGATCTACTGCTGGTGCTGCGCTTTGCTCGCACATGGACGTAGACAAGATA
AGCTTCACAGGTTCGACAGAAGTTGGGCGTCTAGTAATGCAAGCTGCAGCGCTGAGCAAT
TTGAAACCTGTCTCACTAGAATTAGGAGGCAAGTCGCCTTTTATAGTATTTGACGATGTA
GATGTTGACAAAGTTGCACCTCTTGCTATGATTGGAATTTTATATAACAAGGGAGAAGTT
TGTGTGGCTGGATCTCGTCTTTTCATCCAAGAAGGAATTTACGATAAGTTTGTCAAGAAA
TTGGTGGAGATAACGAAAACATGGGTGGTTGGCGATACTTTTGATCCAAATTCTCATCAA
GGACCTCAAGTCGATAAGAAACAGTTTGAGAGAGTACTTTCATACATTGAACATGGAAAG
AGGGAGGGCGCAACATTGTTAACCGGGGGCAACGCATTGGATCGGAAGGGTTATTTCGTT
GAGCCAACCATATTCACCGATGTAGAAGATCATATGACTATTGCAAAAGAAGAAATATTT
GGACCTGTTTTATCAGTAATGAAGTTCAAGACCGTAGAGGAAGTGATCAAGAGAGCTAAT
TGTACACAGTATGGATTAGCAGCTGGTGTTATGACAAATAACTTGAACATTGCCAACACA
GTTTCAAGATCGATTCGAGCTGGAGTTATCTGGATAAACTGTTACTTTGCTTTCGATCCG
GATTGCCCGTATGGAGGATACAAATCCAGTGGCTTTGAAAGGGATTTAGGAATGGAAGGA
CTTCACAAGTATCTTCAAGTTAAATCTGTAGCCACTCCCATTTACAACTCCCCTTGGCTG
TAA

Peptide Sequence

PEP ID

XP_016459751.1
PEP Infomation

PREDICTED: aldehyde dehydrogenase family 2 member C4 [Nicotiana tabacum]
Sequence

MVKSNGNLESHFQIPKIKFTQLFINGEFVDSVSGNTFETIDPRNEEVIARIAEGDKADID
LAVKAAREAFDNGPWPRLSPMERRNIMLKFADLIIENAEEIAALDAMDAGKLFAAGKTID
VPSAAQFMRYYAGAADKIHGTTLKMSRDIQGYTLLEPIGVVGHIIPWNFPTQMFVMKVGP
ALAAGCTMVVKPAEQTPLSALYYAQLAKQAGVPDGVINVVTGFGSTAGAALCSHMDVDKI
SFTGSTEVGRLVMQAAALSNLKPVSLELGGKSPFIVFDDVDVDKVAPLAMIGILYNKGEV
CVAGSRLFIQEGIYDKFVKKLVEITKTWVVGDTFDPNSHQGPQVDKKQFERVLSYIEHGK
REGATLLTGGNALDRKGYFVEPTIFTDVEDHMTIAKEEIFGPVLSVMKFKTVEEVIKRAN
CTQYGLAAGVMTNNLNIANTVSRSIRAGVIWINCYFAFDPDCPYGGYKSSGFERDLGMEG
LHKYLQVKSVATPIYNSPWL

Transcript Sequence

Gene sequence data has not been registered.